Have you worked with any specific databases or repositories commonly used in bioinformatics research?

Sample interview questions: Have you worked with any specific databases or repositories commonly used in bioinformatics research?

Sample answer:

• Sequence databases: GenBank, EMBL, DDBJ, RefSeq, UniProt
• Structural databases: Protein Data Bank (PDB), RCSB PDB, EMDB, PDBj
• Gene expression databases: Gene Expression Omnibus (GEO), ArrayExpress, Sequence Read Archive (SRA)
• Variant databases: dbSNP, ClinVar, COSMIC
• Pathway databases: KEGG, Reactome, BioCyc, MetaCyc
• Ontologies: Gene Ontology (GO), Medical Subject Headings (MeSH), Sequence Ontology (SO)
• Other relevant databases: PubMed, MEDLINE, OMIM

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